Hesketh, Sophie Janine ORCID: https://orcid.org/0000-0002-3107-8842 (2020) Developing our understanding of the Transient Receptor Potential Melastatin 2 (TRPM2) channel. PhD thesis, University of Leeds.
Abstract
Transient receptor potential (TRP) melastatin 2 (TRPM2) is a non-selective cation channel of the TRP channel superfamily. It plays key roles in mediating oxidative stress and immune responses and is endogenously activated at ~37 °C – human body temperature. Here, the styrene-maleic acid (SMA) co-polymer and a combination of detergents were used to biochemically, biophysically and structurally characterise the TRPM2 cation channel in vitro. Through these experiments, fascinating insights were gained into TRPM2 structure and function as a temperature sensor, as well as the role of native lipids in channel stabilisation.
The use of SMA was crucial to the success of these studies, but inherent issues with the polymer can render it unsuitable for use with some biophysical techniques – particularly mass spectrometry (MS) and electron microscopy (EM), and functional assays requiring divalent cations. In light of this, an ‘SMA-exchange’ was also developed, whereby the power of SMA as a solubilisation agent is utilised for extraction and purification, then exchanged for another solubilisation platform to enhance compatibility with downstream applications.
Overall, novel structural and functional mechanisms of the TRPM2 cation channel have been suggested, and when bottlenecks were met in TRPM2 characterisation, an exchange method was developed to circumvent the issues.
Metadata
Supervisors: | Muench, Stephen and Sivaprasadarao, Asipu |
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Related URLs: | |
Keywords: | Transient receptor potential melastatin 2; TRPM2; AcrB; Styre-maleic acid; SMA; Detergent; DDM; Amphipol; A8-35; Lipid Thin Layer Chromatography; Lipid TLC; Circular Dichroism; CD; Electron Microscopy; EM; Structural Biology; SMA-Exchange |
Awarding institution: | University of Leeds |
Academic Units: | The University of Leeds > University of Leeds Research Centres and Institutes > Astbury Centre for Structural Molecular Biology (Leeds) The University of Leeds > Faculty of Biological Sciences (Leeds) > Institute for Molecular and Cellular Biology (Leeds) The University of Leeds > Faculty of Biological Sciences (Leeds) > Institute of Membrane and Systems Biology (Leeds) |
Academic unit: | School of Biomedical Sciences |
Identification Number/EthosID: | uk.bl.ethos.819373 |
Depositing User: | Miss Sophie Janine Hesketh |
Date Deposited: | 02 Dec 2020 14:31 |
Last Modified: | 11 Jan 2022 10:54 |
Open Archives Initiative ID (OAI ID): | oai:etheses.whiterose.ac.uk:28039 |
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