West, Helena ORCID: https://orcid.org/0000-0003-2120-278X (2022) Investigating the regulation of fos during embryonic wound healing and morphogenesis in Xenopus. MSc by research thesis, University of York.
Abstract
Extracellular signal-related kinase (ERK) regulates gene expression through substrate
phosphorylation. The conserved transcriptional repressor Capicua (CIC) is negatively
regulated via ERK-mediated phosphorylation. Both fibroblast growth factor (FGF)
signalling and embryonic wounding activate ERK, however the contribution of CIC to
transcriptional regulation in these contexts is understudied. It was hypothesised that
ERK relieves CIC-mediated repression downstream of FGF signalling and
post-wounding during Xenopus development; this project aimed to identify targets of
CIC/FGF and investigate their regulation in these contexts.
Here, 44 putative CIC/FGF target genes, including the AP-1 gene fos, were identified
through gene-level differential expression analysis of RNA-seq data from FGF4
overexpressing and CIC knockdown X. tropicalis embryos. Xenopus embryos were
treated with FGF (SU5402), MEK (PD0325901) or nitric oxide (NO) synthase (TRIM)
chemical inhibitors and the expression of fos and activated ERK investigated via in situ
hybridisation and immunostaining, respectively. Gastrula stage expression of fos was
found to be FGF-dependent, and CIC binding motifs were identified within a conserved
region of fos intron 1. Corroborating with CIC/ERK-mediated regulation, fos expression
was reduced following ERK inhibition during embryonic wound healing. Inhibiting NO
production elevated activated ERK expression post-wounding, thus NO may negatively
regulate fos expression via ERK. Inhibiting ERK activation similarly reduced fos
expression during neurulation, suggesting comparable mechanisms may govern wound
healing and morphogenesis. Other CIC targets representing AP-1 genes, namely jun
and atf3, were also found to be expressed post-wounding and during neurulation.
Overall therefore, the data support the hypothesis, and propose a novel role for CIC in
intron mediated enhancement of the CIC/FGF target gene fos, and a wider role for CIC
in regulating AP-1 gene expression during wound healing and morphogenesis.
Metadata
Supervisors: | Isaacs, Harry and Pownall, Mary Elizabeth |
---|---|
Keywords: | FGF, Capicua, fos, Xenopus, AP-1 |
Awarding institution: | University of York |
Academic Units: | The University of York > Biology (York) |
Depositing User: | Miss Helena West |
Date Deposited: | 21 Oct 2022 10:56 |
Last Modified: | 21 Oct 2022 10:56 |
Open Archives Initiative ID (OAI ID): | oai:etheses.whiterose.ac.uk:31505 |
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