Data S6: Gene Ontology (GO) enrichment of the downregulated differentially expressed genes before and after drought stress was carried out using agriGO Singular Enrichment Analysis. 258 enriched GO terms were identified.,,,,,,
,,,,,,
GO term,Ontology,Description,Number in input list,Number in BG/Ref,p-value,FDR
GO:0015979,P,photosynthesis,107,194,7.90E-79,3.10E-76
GO:0055114,P,oxidation-reduction process,391,3589,3.50E-31,6.80E-29
GO:0044710,P,single-organism metabolic process,605,6512,2.00E-27,2.50E-25
GO:0044699,P,single-organism process,768,9023,2.20E-23,2.10E-21
GO:0051186,P,cofactor metabolic process,77,529,8.70E-14,6.80E-12
GO:0045454,P,cell redox homeostasis,56,323,1.40E-13,9.10E-12
GO:0005975,P,carbohydrate metabolic process,182,1787,1.60E-13,9.10E-12
GO:0019725,P,cellular homeostasis,59,355,2.10E-13,1.00E-11
GO:0072524,P,pyridine-containing compound metabolic process,44,224,6.40E-13,2.80E-11
GO:0015995,P,chlorophyll biosynthetic process,14,24,4.10E-12,1.60E-10
GO:0042592,P,homeostatic process,59,386,7.60E-12,2.50E-10
GO:0065008,P,regulation of biological quality,66,459,7.80E-12,2.50E-10
GO:0015994,P,chlorophyll metabolic process,15,31,2.60E-11,7.80E-10
GO:0033014,P,tetrapyrrole biosynthetic process,26,100,4.60E-11,1.30E-09
GO:0008152,P,metabolic process,1443,20709,4.90E-11,1.30E-09
GO:0033013,P,tetrapyrrole metabolic process,27,114,2.00E-10,4.90E-09
GO:0019362,P,pyridine nucleotide metabolic process,38,211,3.10E-10,6.80E-09
GO:0046496,P,nicotinamide nucleotide metabolic process,38,211,3.10E-10,6.80E-09
GO:0019682,P,glyceraldehyde-3-phosphate metabolic process,15,37,5.80E-10,1.20E-08
GO:0009052,P,"pentose-phosphate shunt, non-oxidative branch",8,9,9.20E-10,1.80E-08
GO:0051156,P,glucose 6-phosphate metabolic process,14,34,1.70E-09,2.80E-08
GO:0006979,P,response to oxidative stress,49,334,1.60E-09,2.80E-08
GO:0006098,P,pentose-phosphate shunt,14,34,1.70E-09,2.80E-08
GO:0006732,P,coenzyme metabolic process,55,398,1.60E-09,2.80E-08
GO:0006733,P,oxidoreduction coenzyme metabolic process,38,227,2.60E-09,4.10E-08
GO:0046148,P,pigment biosynthetic process,20,77,7.70E-09,1.20E-07
GO:0006779,P,porphyrin-containing compound biosynthetic process,18,63,8.20E-09,1.20E-07
GO:0019693,P,ribose phosphate metabolic process,54,407,9.50E-09,1.30E-07
GO:0042440,P,pigment metabolic process,21,91,3.20E-08,4.20E-07
GO:0006081,P,cellular aldehyde metabolic process,17,61,3.20E-08,4.20E-07
GO:0006778,P,porphyrin-containing compound metabolic process,19,77,4.40E-08,5.60E-07
GO:0006739,P,NADP metabolic process,14,45,1.10E-07,1.40E-06
GO:0046034,P,ATP metabolic process,39,279,2.50E-07,2.90E-06
GO:0006091,P,generation of precursor metabolites and energy,44,346,6.60E-07,7.60E-06
GO:0009199,P,ribonucleoside triphosphate metabolic process,39,297,1.20E-06,1.30E-05
GO:0009144,P,purine nucleoside triphosphate metabolic process,39,297,1.20E-06,1.30E-05
GO:0009205,P,purine ribonucleoside triphosphate metabolic process,39,297,1.20E-06,1.30E-05
GO:0009167,P,purine ribonucleoside monophosphate metabolic process,40,315,2.10E-06,2.00E-05
GO:0009116,P,nucleoside metabolic process,46,385,2.10E-06,2.00E-05
GO:1901657,P,glycosyl compound metabolic process,46,385,2.10E-06,2.00E-05
GO:0009126,P,purine nucleoside monophosphate metabolic process,40,315,2.10E-06,2.00E-05
GO:0006757,P,ATP generation from ADP,24,146,2.70E-06,2.10E-05
GO:0006096,P,glycolytic process,24,146,2.70E-06,2.10E-05
GO:0046031,P,ADP metabolic process,24,146,2.70E-06,2.10E-05
GO:0009179,P,purine ribonucleoside diphosphate metabolic process,24,146,2.70E-06,2.10E-05
GO:0009135,P,purine nucleoside diphosphate metabolic process,24,146,2.70E-06,2.10E-05
GO:0009141,P,nucleoside triphosphate metabolic process,39,306,2.50E-06,2.10E-05
GO:0015833,P,peptide transport,16,73,2.70E-06,2.10E-05
GO:0009185,P,ribonucleoside diphosphate metabolic process,24,146,2.70E-06,2.10E-05
GO:0006857,P,oligopeptide transport,16,73,2.70E-06,2.10E-05
GO:0042886,P,amide transport,16,73,2.70E-06,2.10E-05
GO:0006544,P,glycine metabolic process,9,24,3.60E-06,2.70E-05
GO:0006090,P,pyruvate metabolic process,26,169,3.90E-06,2.80E-05
GO:0009161,P,ribonucleoside monophosphate metabolic process,40,325,4.50E-06,3.30E-05
GO:0009123,P,nucleoside monophosphate metabolic process,40,328,5.70E-06,4.00E-05
GO:0016052,P,carbohydrate catabolic process,27,184,6.30E-06,4.40E-05
GO:0044724,P,single-organism carbohydrate catabolic process,24,155,7.90E-06,5.40E-05
GO:0015976,P,carbon utilization,7,15,8.10E-06,5.40E-05
GO:0055086,P,nucleobase-containing small molecule metabolic process,61,593,8.10E-06,5.40E-05
GO:0006165,P,nucleoside diphosphate phosphorylation,24,161,1.50E-05,9.80E-05
GO:0046939,P,nucleotide phosphorylation,24,161,1.50E-05,9.80E-05
GO:0051188,P,cofactor biosynthetic process,37,308,1.70E-05,0.00011
GO:0009132,P,nucleoside diphosphate metabolic process,24,164,2.10E-05,0.00013
GO:0006546,P,glycine catabolic process,6,12,2.30E-05,0.00014
GO:0009071,P,serine family amino acid catabolic process,6,12,2.30E-05,0.00014
GO:0042372,P,phylloquinone biosynthetic process,5,8,2.80E-05,0.00017
GO:0042374,P,phylloquinone metabolic process,5,8,2.80E-05,0.00017
GO:0009117,P,nucleotide metabolic process,54,529,3.10E-05,0.00018
GO:0009069,P,serine family amino acid metabolic process,15,79,3.40E-05,0.00019
GO:0006753,P,nucleoside phosphate metabolic process,54,532,3.60E-05,0.0002
GO:0042822,P,pyridoxal phosphate metabolic process,6,13,4.00E-05,0.00021
GO:0042823,P,pyridoxal phosphate biosynthetic process,6,13,4.00E-05,0.00021
GO:0042816,P,vitamin B6 metabolic process,6,13,4.00E-05,0.00021
GO:0042819,P,vitamin B6 biosynthetic process,6,13,4.00E-05,0.00021
GO:0042278,P,purine nucleoside metabolic process,39,349,5.30E-05,0.00027
GO:0046128,P,purine ribonucleoside metabolic process,39,349,5.30E-05,0.00027
GO:0009119,P,ribonucleoside metabolic process,39,354,7.20E-05,0.00036
GO:0009150,P,purine ribonucleotide metabolic process,40,369,8.30E-05,0.00042
GO:0000160,P,phosphorelay signal transduction system,18,116,9.80E-05,0.00049
GO:0009259,P,ribonucleotide metabolic process,40,373,0.00011,0.00051
GO:0019637,P,organophosphate metabolic process,75,851,0.00015,0.00075
GO:0055085,P,transmembrane transport,127,1626,0.00028,0.0013
GO:0071705,P,nitrogen compound transport,18,127,0.00031,0.0015
GO:0006163,P,purine nucleotide metabolic process,40,394,0.00033,0.0015
GO:0009690,P,cytokinin metabolic process,7,25,0.00037,0.0016
GO:0042445,P,hormone metabolic process,7,25,0.00037,0.0016
GO:0010817,P,regulation of hormone levels,7,25,0.00037,0.0016
GO:0034754,P,cellular hormone metabolic process,7,25,0.00037,0.0016
GO:0044763,P,single-organism cellular process,344,5011,0.00039,0.0017
GO:0044723,P,single-organism carbohydrate metabolic process,65,738,0.0004,0.0017
GO:0006810,P,transport,251,3553,0.00044,0.0019
GO:0072521,P,purine-containing compound metabolic process,42,427,0.00046,0.0019
GO:1901135,P,carbohydrate derivative metabolic process,71,829,0.0005,0.0021
GO:0051234,P,establishment of localization,251,3571,0.00057,0.0024
GO:0006811,P,ion transport,79,954,0.00068,0.0028
GO:0044281,P,small molecule metabolic process,157,2127,0.00076,0.0031
GO:0051179,P,localization,251,3594,0.0008,0.0032
GO:0042493,P,response to drug,21,173,0.00088,0.0034
GO:0006855,P,drug transmembrane transport,21,173,0.00088,0.0034
GO:0015893,P,drug transport,21,173,0.00088,0.0034
GO:0015985,P,"energy coupled proton transport, down electrochemical gradient",12,75,0.001,0.0039
GO:0015986,P,ATP synthesis coupled proton transport,12,75,0.001,0.0039
GO:0045229,P,external encapsulating structure organization,13,86,0.0011,0.0041
GO:1901605,P,alpha-amino acid metabolic process,34,340,0.0011,0.0041
GO:0071555,P,cell wall organization,13,86,0.0011,0.0041
GO:0019318,P,hexose metabolic process,15,108,0.0012,0.0043
GO:0046854,P,phosphatidylinositol phosphorylation,6,23,0.0014,0.0052
GO:0046834,P,lipid phosphorylation,6,23,0.0014,0.0052
GO:0044712,P,single-organism catabolic process,36,373,0.0015,0.0054
GO:0018208,P,peptidyl-proline modification,11,73,0.0027,0.0094
GO:0000413,P,protein peptidyl-prolyl isomerization,11,73,0.0027,0.0094
GO:0006812,P,cation transport,62,761,0.0033,0.012
GO:0005996,P,monosaccharide metabolic process,17,146,0.004,0.014
GO:0019953,P,sexual reproduction,6,28,0.0042,0.015
GO:0008299,P,isoprenoid biosynthetic process,13,101,0.0047,0.016
GO:0044711,P,single-organism biosynthetic process,110,1510,0.0056,0.019
GO:1901663,P,quinone biosynthetic process,6,30,0.0061,0.02
GO:1901661,P,quinone metabolic process,6,30,0.0061,0.02
GO:0006720,P,isoprenoid metabolic process,13,104,0.0061,0.02
GO:0042181,P,ketone biosynthetic process,6,30,0.0061,0.02
GO:0006563,P,L-serine metabolic process,9,61,0.0072,0.023
GO:0006754,P,ATP biosynthetic process,12,95,0.0075,0.024
GO:1901606,P,alpha-amino acid catabolic process,7,41,0.0077,0.025
GO:0044283,P,small molecule biosynthetic process,48,590,0.0088,0.028
GO:0050896,P,response to stimulus,141,2044,0.012,0.038
GO:0006820,P,anion transport,16,153,0.014,0.043
GO:0030244,P,cellulose biosynthetic process,11,92,0.015,0.046
GO:0071669,P,plant-type cell wall organization or biogenesis,7,47,0.016,0.049
GO:0009664,P,plant-type cell wall organization,7,47,0.016,0.049
GO:0000041,P,transition metal ion transport,8,58,0.016,0.049
GO:0016491,F,oxidoreductase activity,437,3803,2.20E-39,6.00E-37
GO:0046906,F,tetrapyrrole binding,171,1202,6.40E-27,8.60E-25
GO:0020037,F,heme binding,165,1187,5.50E-25,4.90E-23
GO:0016705,F,"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen",136,984,8.50E-21,5.70E-19
GO:0015035,F,protein disulfide oxidoreductase activity,40,141,1.30E-17,7.00E-16
GO:0015036,F,disulfide oxidoreductase activity,40,147,6.50E-17,2.90E-15
GO:0005506,F,iron ion binding,126,1006,4.50E-16,1.70E-14
GO:0009055,F,electron carrier activity,70,418,9.70E-16,3.20E-14
GO:0016667,F,"oxidoreductase activity, acting on a sulfur group of donors",44,200,9.60E-15,2.80E-13
GO:0003824,F,catalytic activity,1460,20339,5.80E-14,1.60E-12
GO:0016655,F,"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor",24,91,1.80E-10,4.50E-09
GO:0004751,F,ribose-5-phosphate isomerase activity,8,9,9.20E-10,2.00E-08
GO:0004601,F,peroxidase activity,51,353,1.30E-09,2.80E-08
GO:0016684,F,"oxidoreductase activity, acting on peroxide as acceptor",51,358,2.20E-09,4.20E-08
GO:2001070,F,starch binding,12,27,8.70E-09,1.60E-07
GO:0005215,F,transporter activity,181,2045,9.80E-09,1.60E-07
GO:0016630,F,protochlorophyllide reductase activity,6,6,3.30E-08,5.20E-07
GO:0016209,F,antioxidant activity,51,398,7.30E-08,1.10E-06
GO:0008171,F,O-methyltransferase activity,21,99,1.50E-07,2.10E-06
GO:0050662,F,coenzyme binding,82,788,1.80E-07,2.40E-06
GO:0016829,F,lyase activity,68,617,2.30E-07,2.90E-06
GO:0016651,F,"oxidoreductase activity, acting on NAD(P)H",29,177,2.90E-07,3.40E-06
GO:0010333,F,terpene synthase activity,18,78,3.00E-07,3.40E-06
GO:0016838,F,"carbon-oxygen lyase activity, acting on phosphates",19,88,4.30E-07,4.80E-06
GO:0004332,F,fructose-bisphosphate aldolase activity,9,20,5.80E-07,6.20E-06
GO:0048037,F,cofactor binding,108,1170,1.00E-06,1.00E-05
GO:0008883,F,glutamyl-tRNA reductase activity,6,9,2.40E-06,2.40E-05
GO:0016832,F,aldehyde-lyase activity,10,29,2.50E-06,2.40E-05
GO:0016628,F,"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor",11,36,3.10E-06,2.90E-05
GO:0050661,F,NADP binding,24,149,4.00E-06,3.50E-05
GO:0046983,F,protein dimerization activity,92,989,4.20E-06,3.60E-05
GO:0030246,F,carbohydrate binding,56,522,5.40E-06,4.50E-05
GO:0016758,F,"transferase activity, transferring hexosyl groups",103,1147,5.50E-06,4.50E-05
GO:0016835,F,carbon-oxygen lyase activity,34,262,7.20E-06,5.70E-05
GO:0016620,F,"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor",14,66,1.70E-05,0.00013
GO:0051536,F,iron-sulfur cluster binding,31,240,1.90E-05,0.00014
GO:0051540,F,metal cluster binding,31,240,1.90E-05,0.00014
GO:0051537,F,"2 iron, 2 sulfur cluster binding",17,95,2.40E-05,0.00017
GO:0016861,F,"intramolecular oxidoreductase activity, interconverting aldoses and ketoses",10,37,2.90E-05,0.0002
GO:0004553,F,"hydrolase activity, hydrolyzing O-glycosyl compounds",84,938,3.90E-05,0.00026
GO:0042132,F,"fructose 1,6-bisphosphate 1-phosphatase activity",6,13,4.00E-05,0.00026
GO:0030247,F,polysaccharide binding,22,153,5.90E-05,0.00037
GO:0001871,F,pattern binding,22,153,5.90E-05,0.00037
GO:0016903,F,"oxidoreductase activity, acting on the aldehyde or oxo group of donors",15,85,8.30E-05,0.0005
GO:0016798,F,"hydrolase activity, acting on glycosyl bonds",89,1031,8.70E-05,0.00052
GO:0016168,F,chlorophyll binding,6,15,0.00011,0.00062
GO:0004185,F,serine-type carboxypeptidase activity,18,117,0.00011,0.00063
GO:0004072,F,aspartate kinase activity,5,10,0.00012,0.00065
GO:0030145,F,manganese ion binding,16,98,0.00013,0.00068
GO:0004497,F,monooxygenase activity,21,150,0.00013,0.00068
GO:0004089,F,carbonate dehydratase activity,7,22,0.00015,0.00079
GO:0005509,F,calcium ion binding,64,702,0.00018,0.00091
GO:0003993,F,acid phosphatase activity,15,91,0.00018,0.00092
GO:0004180,F,carboxypeptidase activity,18,123,0.00021,0.001
GO:0050660,F,flavin adenine dinucleotide binding,36,337,0.00024,0.0012
GO:0008137,F,NADH dehydrogenase (ubiquinone) activity,11,56,0.00027,0.0012
GO:0050136,F,NADH dehydrogenase (quinone) activity,11,56,0.00027,0.0012
GO:0003954,F,NADH dehydrogenase activity,11,56,0.00027,0.0012
GO:0016709,F,"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen",13,76,0.00033,0.0015
GO:0019139,F,cytokinin dehydrogenase activity,7,25,0.00037,0.0016
GO:0016627,F,"oxidoreductase activity, acting on the CH-CH group of donors",18,130,0.00042,0.0018
GO:0016860,F,intramolecular oxidoreductase activity,10,50,0.00044,0.0019
GO:0050308,F,sugar-phosphatase activity,6,19,0.00047,0.002
GO:0019203,F,carbohydrate phosphatase activity,6,19,0.00047,0.002
GO:0035251,F,UDP-glucosyltransferase activity,22,179,0.00057,0.0023
GO:0070008,F,serine-type exopeptidase activity,18,134,0.00061,0.0025
GO:0016791,F,phosphatase activity,30,279,0.00067,0.0027
GO:0046527,F,glucosyltransferase activity,22,182,0.00071,0.0028
GO:0090484,F,drug transporter activity,21,173,0.00088,0.0033
GO:0046872,F,metal ion binding,390,5814,0.00087,0.0033
GO:0015238,F,drug transmembrane transporter activity,21,173,0.00088,0.0033
GO:0016757,F,"transferase activity, transferring glycosyl groups",111,1443,0.001,0.0038
GO:0004373,F,glycogen (starch) synthase activity,6,22,0.0011,0.0041
GO:0016859,F,cis-trans isomerase activity,12,76,0.0012,0.0042
GO:0043169,F,cation binding,396,5951,0.0013,0.0047
GO:0016774,F,"phosphotransferase activity, carboxyl group as acceptor",8,39,0.0013,0.0048
GO:0043167,F,ion binding,415,6267,0.0015,0.0051
GO:0048038,F,quinone binding,8,41,0.0019,0.0064
GO:0016645,F,"oxidoreductase activity, acting on the CH-NH group of donors",8,41,0.0019,0.0064
GO:0046933,F,"proton-transporting ATP synthase activity, rotational mechanism",8,42,0.0022,0.0074
GO:0003755,F,peptidyl-prolyl cis-trans isomerase activity,11,73,0.0027,0.0088
GO:0008238,F,exopeptidase activity,21,191,0.003,0.0098
GO:0016830,F,carbon-carbon lyase activity,22,205,0.0033,0.011
GO:0016788,F,"hydrolase activity, acting on ester bonds",87,1140,0.0039,0.012
GO:0016759,F,cellulose synthase activity,11,79,0.005,0.015
GO:0016760,F,cellulose synthase (UDP-forming) activity,11,79,0.005,0.015
GO:0004611,F,phosphoenolpyruvate carboxykinase activity,5,21,0.0055,0.017
GO:0016717,F,"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water",7,39,0.0058,0.018
GO:0046915,F,transition metal ion transmembrane transporter activity,8,49,0.006,0.018
GO:0071949,F,FAD binding,7,40,0.0067,0.02
GO:0019202,F,amino acid kinase activity,5,22,0.0068,0.02
GO:0000287,F,magnesium ion binding,27,287,0.0075,0.022
GO:0004499,F,"N,N-dimethylaniline monooxygenase activity",9,63,0.0089,0.025
GO:0016765,F,"transferase activity, transferring alkyl or aryl (other than methyl) groups",12,97,0.0089,0.025
GO:0016853,F,isomerase activity,37,432,0.0092,0.026
GO:0016857,F,"racemase and epimerase activity, acting on carbohydrates and derivatives",6,34,0.011,0.031
GO:0016846,F,carbon-sulfur lyase activity,6,34,0.011,0.031
GO:0045735,F,nutrient reservoir activity,11,89,0.012,0.033
GO:0044769,F,"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism",8,58,0.016,0.044
GO:0042578,F,phosphoric ester hydrolase activity,34,406,0.016,0.044
GO:0016854,F,racemase and epimerase activity,6,37,0.017,0.045
GO:0016160,F,amylase activity,7,48,0.018,0.047
GO:0052689,F,carboxylic ester hydrolase activity,15,145,0.018,0.047
GO:0061733,F,peptide-lysine-N-acetyltransferase activity,5,28,0.019,0.048
GO:0034212,F,peptide N-acetyltransferase activity,5,28,0.019,0.048
GO:0004402,F,histone acetyltransferase activity,5,28,0.019,0.048
GO:0005385,F,zinc ion transmembrane transporter activity,5,28,0.019,0.048
GO:0008146,F,sulfotransferase activity,8,60,0.02,0.049
GO:0044436,C,thylakoid part,95,161,4.50E-74,1.20E-72
GO:0009579,C,thylakoid,95,161,4.50E-74,1.20E-72
GO:0034357,C,photosynthetic membrane,92,157,2.00E-71,3.60E-70
GO:0009521,C,photosystem,89,147,6.00E-71,8.00E-70
GO:0009523,C,photosystem II,59,98,1.70E-47,1.80E-46
GO:0009654,C,photosystem II oxygen evolving complex,48,74,3.10E-41,2.70E-40
GO:0042651,C,thylakoid membrane,51,87,1.80E-40,1.40E-39
GO:1990204,C,oxidoreductase complex,51,119,1.10E-31,7.50E-31
GO:0019898,C,extrinsic component of membrane,39,67,3.60E-31,2.10E-30
GO:0009522,C,photosystem I,30,41,7.80E-29,4.10E-28
GO:0098796,C,membrane protein complex,97,522,2.00E-24,9.70E-24
GO:0009538,C,photosystem I reaction center,15,15,2.10E-19,9.10E-19
GO:0016020,C,membrane,402,4744,7.00E-14,2.90E-13
GO:0044425,C,membrane part,218,2625,5.80E-08,2.20E-07
GO:0009536,C,plastid,14,45,1.10E-07,3.70E-07
GO:0009507,C,chloroplast,14,45,1.10E-07,3.70E-07
GO:1902494,C,catalytic complex,53,435,2.10E-07,6.60E-07
GO:0005576,C,extracellular region,30,282,0.00079,0.0023
GO:0005618,C,cell wall,13,109,0.0089,0.025
GO:0030312,C,external encapsulating structure,13,110,0.0096,0.025